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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009027 chr22:47289785 C/T LMF2 chr22:50941378-50946120:- -0.65 -7.73 6.44E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T LOC284900 chr22:28315364-28404267:+ -0.52 -7.02 7.84E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T LOC646851 chr22:38974125-39052634:- -0.47 -6.39 3.83E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T LZTR1 chr22:21333751-21353327:+ -0.65 -7.21 2.16E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T MAPK1 chr22:22108789-22221970:- -0.55 -7.8 3.92E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T MCAT chr22:43528212-43539400:- -0.64 -8.62 1.02E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T MICALL1 chr22:38301664-38338829:+ -0.5 -5.97 4.73E-9 Box Plot
THCA rs6009027 chr22:47289785 C/T MKL1 chr22:40806285-41032706:- -0.62 -7.08 5.11E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T MORC2 chr22:31321117-31364284:- -0.64 -6.36 4.79E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T MPST chr22:37415676-37425863:+ -0.53 -6.69 6.08E-11 Box Plot
THCA rs6009027 chr22:47289785 C/T MTMR3 chr22:30279144-30426855:+ -0.68 -7.96 1.23E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T MTP18 chr22:30805176-30825041:+ -0.59 -6.59 1.19E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T NCAPH2 chr22:50946645-50961901:+ -0.71 -8.2 2.25E-15 Box Plot
THCA rs6009027 chr22:47289785 C/T NDUFA6 chr22:42481529-42486959:- -0.61 -7.46 4.19E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T NF2 chr22:29999545-30094587:+ -0.57 -5.94 5.38E-9 Box Plot